PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PEQU_06750
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Vandeae; Aeridinae; Phalaenopsis
Family TCP
Protein Properties Length: 326aa    MW: 36663.7 Da    PI: 9.3038
Description TCP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PEQU_06750genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1TCP121.21.2e-37541973133
         TCP   3 gkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgt.......ssssaseceaesssssasnsssg...... 88 
                  +kd hski+T++g+RdRR+R s+++a+++FdLqd LGfdk+skt++W l+++k+aikel+g        sss     e+ s +s ++    +      
  PEQU_06750  54 MRKDMHSKIYTAKGPRDRRMRFSLDVARKLFDLQDLLGFDKASKTVQWILTMSKAAIKELVGAasicmvvSSSEG---EDISTVSDNK----Distsai 145
                 69*************************************************************544443311111...1222222222....1224455 PP

         TCP  89 .....kaaksaakskksqksaasalnlakesrakarar..arertrekmrik 133
                      +++++ +++  ++++ ++   +ake r+karar  arert ek++++
  PEQU_06750 146 fasefEKNAKPKSRILRSRPISQPKLVAKELREKARARarARERTLEKKMMR 197
                 5666633333333344444444445666676655555533888999999887 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF036342.1E-3655196IPR005333Transcription factor, TCP
PROSITE profilePS5136932.10455113IPR017887Transcription factor TCP subgroup
PROSITE profilePS5137010.072174193IPR017888CYC/TB1, R domain
Sequence ? help Back to Top
Protein Sequence    Length: 326 aa     Download sequence    Send to blast
MFSQPYYTSS SFFPFSPPAF HQYSLHDIFI PAASGAEAGA PVSAQPIAGW KRKMRKDMHS  60
KIYTAKGPRD RRMRFSLDVA RKLFDLQDLL GFDKASKTVQ WILTMSKAAI KELVGAASIC  120
MVVSSSEGED ISTVSDNKDI STSAIFASEF EKNAKPKSRI LRSRPISQPK LVAKELREKA  180
RARARARERT LEKKMMRCCR PEDGSKSNQQ ANILKSIPLG SFLQEEYSSS HDLKSSLDFV  240
AEMEEHCSTS PIMYAKEHDH NGSSSAVVFD CNQQTAVSLF QEQWDHRSAF PNNYMDEKVL  300
FGEVSLQTSY GRGISMPSMF DHVTRV
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP72533651
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G68800.12e-24TCP domain protein 12